| 30 Dec 2024 |
What we learned about binder design from the Adaptyv competition |
| 30 Nov 2024 |
The ABCs of Alphafold 3, Boltz and Chai-1 |
| 07 Sep 2024 |
The Adaptyv binder design competition |
| 27 Jul 2024 |
A simple evolution simulation |
| 31 Mar 2024 |
Evaluating longevity drugs with LLMs |
| 14 Jan 2024 |
Progress towards parsing publications with LLMs |
| 26 Nov 2023 |
Using modal for bioinformatics |
| 04 Sep 2023 |
A simple way to simulate protein–ligand interactions (that does not work) |
| 25 Jun 2023 |
Colab and computational tools for drug design |
| 25 Feb 2023 |
Using GPT-3 as a knowledge-base in biotech |
| 02 Jul 2022 |
Computational tools for drug development |
| 17 Jan 2022 |
The baffling COR |
| 30 Oct 2021 |
Modern biotech data infrastructure |
| 03 Oct 2021 |
Permutation tests are good |
| 15 Feb 2021 |
Sequencing a human genome at home |
| 02 Jan 2021 |
Modeling EV range with a multilevel model |
| 02 Aug 2020 |
Numpyro probabilistic model of blood glucose |
| 04 Jul 2020 |
Water purity analysis with a GeneQuant |
| 19 Apr 2020 |
A month with a CGM: an analysis of blood glucose responses to food |
| 27 Jul 2019 |
DNA sequencing at home with the flongle |
| 02 Jun 2019 |
Comparing bioinformatics workflow systems: nextflow, snakemake, reflow |
| 23 Mar 2019 |
Tools for working on the cloud |
| 20 Jan 2019 |
Instagram celebrity generation using neural nets: Jake Dangerback |
| 11 Nov 2018 |
The Sequencing Gap |
| 12 Jul 2018 |
The amyloid hypothesis |
| 17 Oct 2017 |
DNA alignment with Python, Nim and JavaScript |
| 22 Sep 2017 |
Normal-looking distributions and maximum entropy |
| 11 Sep 2017 |
Y Combinator and Biotech, 2017 |
| 27 Jun 2017 |
Drug Targets and Therapies |
| 06 Feb 2017 |
An Automated Protein Synthesis Pipeline with Transcriptic and Snakemake |
| 26 Jan 2017 |
Internet of Lab Things |
| 10 Oct 2016 |
Oxford Nanopore in 2016 |
| 14 Aug 2016 |
A Toy Oxford Nanopore Simulator Using A Hierarchical Bayesian Model in PyMC3 |
| 05 Jun 2016 |
Cool Things Review |
| 10 Apr 2016 |
Convolutional Neural Net Playing a 3D Game |
| 21 Mar 2016 |
Engineering Proteins in the Cloud with Python and Transcriptic, or, How to Make Any Protein You Want for $360 |
| 10 Aug 2015 |
Transcriptic pUC19 PCR Amplification |
| 16 Jul 2015 |
IPython Notebook Tips |
| 18 Jun 2015 |
Transcriptic E. coli Transformation |
| 13 Jun 2015 |
The Modern Virtual Biotech |
| 29 May 2015 |
Arcturus BioCloud Robot Lab |
| 24 May 2015 |
Natural Knockdowns: myostatin |
| 14 May 2015 |
Oxford Nanopore Conference 2015 |
| 09 May 2015 |
Linear Regression Experiments |
| 19 Apr 2015 |
Kruschke's Doing Bayesian Data Analysis with PyMC3 in an IPython notebook |
| 14 Apr 2015 |
UK Biobank, NIH Data Science |
| 24 Mar 2015 |
BIIB037: Analyzing Biogen's Alzheimer's drug data |
| 30 Jan 2015 |
Choosing a website PaaS: AWS, Azure, Google, etc. |
| 25 Jan 2015 |
Human genetics and drug discovery |
| 06 Jan 2015 |
Biobanks |
| 05 Jan 2015 |
BEST Bayesian t-test |
| 24 Dec 2014 |
OneStart 2015 |
| 16 Nov 2014 |
Mixture of Gaussians in PyMC3 |
| 11 Nov 2014 |
Analyzing Sequencing Read Errors with PyMC3 |
| 20 Oct 2014 |
SBIR Data |
| 24 Sep 2014 |
Naming Boolean Biotech |
| 22 Sep 2014 |
The Africa Soil Property Prediction Challenge |
| 15 Sep 2014 |
Using IPython with Domino |
| 14 Sep 2014 |
Outsourcing Compute |
| 13 Sep 2014 |
Open Data in Neuroscience |
| 12 Sep 2014 |
iGEM Projects |
| 11 Sep 2014 |
Open Data |
| 10 Sep 2014 |
Research Reproducibility |
| 01 Sep 2014 |
Outsourcing Wet-Lab Experiments |
| 30 Aug 2014 |
GenoCAD |
| 16 Aug 2014 |
Hybrid Protein |
| 13 Aug 2014 |
DNA Vaccine Dosing |
| 13 Aug 2014 |
pVAX1 |
| 13 Aug 2014 |
2014-08-13 Progress Report |
| 12 Aug 2014 |
2014-08-12 Progress Report |
| 12 Aug 2014 |
Protein Design |
| 12 Aug 2014 |
Transdermal Drug Delivery |
| 11 Aug 2014 |
2014-08-11 Progress Report |
| 11 Aug 2014 |
Mammalian Promoter Strength |
| 10 Aug 2014 |
2014-08-10 Progress Report |
| 10 Aug 2014 |
iGEM |
| 09 Aug 2014 |
Naked DNA and Hair Follicles |
| 09 Aug 2014 |
2014-08-09 Progress Report |
| 08 Aug 2014 |
2014-08-08 Progress Report |
